ROBERT S.
EISENBERG
Reprints available on this hyperlink
(Last update: October 9, 2010)
[Laboratory
of Robert S. Eisenberg]
Electrical properties of tissues, mostly experimental:
1. Eisenberg, R.S. and Hamilton, D. Action of g-aminobutyric acid on Cancer borealis muscle. Nature 198: 1002-1003 (1963). [PDF]
2. Eisenberg, R.S. Impedance of
single crab muscle fibers. Ph.D. Thesis,
3. Eisenberg, R.S. Equivalent circuit of single crab muscle fibers as determined by impedance measurement with intracellular electrodes. J. Gen. Physiol. 50: 1785-1806 (1967). [PDF]
4. Eisenberg, R.S. and Gage, P.W. Frog skeletal muscle fibers: change in the electrical properties of frog skeletal muscle fibers after disruption of the transverse tubular system. Science 158: 1700-1701 (1967). [PDF]
5. Gage, P.W. and Eisenberg, R.S. Action potentials without contraction in frog skeletal muscle fibers with disrupted transverse tubules. Science 158: 1702-1703 (1967). [PDF]
6. Horowicz, P., Gage, P.W. and Eisenberg, R.S. The role of the electrochemical gradient in determining potassium fluxes in frog striated muscle. J. Gen. Physiol. 51: 193s-203s (1968). [PDF]
7. Eisenberg, B. and Eisenberg, R.S. The transverse tubular system in glycerol treated muscle. Science 160: 1243-1244 (1968). [PDF]
8. Eisenberg, B. and Eisenberg, R.S. Selective disruption of the sarcotubular muscle: A quantitative study with exogenous peroxidase as a marker. J. Cell Biol. 39: 451-467 (1968). [PDF]
9. Gage, P.W. and Eisenberg, R.S. Capacitance of the surface and transverse tubular membrane of frog sartorius muscle fibers. J. Gen. Physiol. 53: 265-278 (1969). [PDF]
10. Eisenberg, R.S. and Gage, P.W. Ionic conductance of the surface and transverse tubular membrane of frog sartorius fibers. J. Gen. Physiol. 53: 279-297 (1969). [PDF]
11. Gage, P.W. and Eisenberg, R.S. Action potentials, after potentials, and excitation-contraction coupling in frog sartorius fibers without transverse tubules. J. Gen. Physiol. 53: 298-310 (1969). [PDF]
12. Eisenberg, R.S., Howell, J. and Vaughan, P. The maintenance of resting potentials in glycerol treated muscle fibers. J. Physiol. 215: 95-102 (1971). [PDF]
13. Vaughan, P., Howell, J. and Eisenberg, R.S. The capacitance of skeletal muscle fibers in solutions of low ionic strength. J. Gen. Physiol. 59: 347-359 (1972). [PDF]
14. Eisenberg, R.S., Vaughan, P. and Howell, J. A theoretical analysis of the capacitance of muscle fibers using a distributed model of the tubular system. J. Gen. Physiol. 59: 360-373 (1972). [PDF]
15. Leung, J. and Eisenberg,
R.S. The effects of the antibiotics gramicidin-A,
amphotericin-B, and nystatin on the electrical properties of frog skeletal
muscle. Biochem. Biophys.
Acta.
16. Valdiosera, R., Clausen, C. and Eisenberg, R.S. Measurement of the impedance of frog skeletal muscle fibers. Biophys. J. 14: 295-315 (1974). [PDF]
17. Valdiosera, R., Clausen, C. and Eisenberg, R.S. Circuit models of the passive electrical properties of frog skeletal muscle fibers. J. Gen. Physiol. 63: 432-459 (1974). [PDF]
18. Valdiosera, R., Clausen, C. and Eisenberg, R.S. Impedance of frog skeletal muscle fibers in various solutions. J. Gen. Physiol. 63: 460-491 (1974). [PDF]
19. Mobley, B.A., Leung, J. and Eisenberg, R.S. Longitudinal impedance of skinned frog muscle fibers. J. Gen. Physiol. 63: 615-637 (1974). [PDF]
20. Mobley, B.A., Leung, J. and Eisenberg, R.S. Longitudinal impedance of single frog muscle fibers. J. Gen. Physiol. 65: 97-113 (1975). [PDF]
21. Eisenberg, R.S. and Rae, J.L. Current-voltage relationships in the crystalline lens. J. Physiol. 262: 285-300 (1976). [PDF]
22. Mathias, R.T., Eisenberg, R.S. and Valdiosera, R. Electrical properties of frog skeletal muscle fibers interpreted with a mesh model of the tubular system. Biophys. J. 17: 57-93 (1977). [PDF]
23. Eisenberg, R.S., Mathias,
R.T. and Rae, J.L. Measurement, modeling and analysis of the linear electrical
properties of cells.
24. Mathias, R.T., Rae, J.L. and Eisenberg, R.S. Electrical properties of structural components of the crystalline lens. Biophys. J. 25: 181-201 (1979). [PDF]
25. Rae, J.L., Eisenberg, R.S. and Mathias, R.T. The lens as a spherical syncytium. Ed. Satish K. Srivastava. Elsevier North Holland Inc. Red Blood Cell and Lens Metabolism. pp. 277-292 (1980). [PDF]
26. Mathias, R.T., Rae, J.L. and Eisenberg, R.S. The lens as a nonuniform spherical syncytium. Biophys. J. 34: 61-85 (1981). [PDF]
27. Eisenberg, B. and Eisenberg, R.S. The T-SR junction in contracting single skeletal muscle fibers. J. Gen. Physiol. 79: 1-20 (1982). [PDF]
28. Rae, J.L., Thomson, R.D. and Eisenberg, R.S. The effect of 2-4 dinitrophenol on cell to cell communication in the frog lens. Exp. Eye Res. 35: 597-610 (1982). [PDF]
29. Rae, J.L., Mathias, R.T. and Eisenberg, R.S. Physiological role of the membranes and extracellular space within the ocular lens. Exp. Eye Res. 35: 471-490 (1982). [PDF]
30. Eisenberg, R.S., McCarthy,
R.T., and
31.
32. Hui, C.S.,
33. Curtis, B.A. and Eisenberg, R.S. Calcium influx in contracting and paralyzed frog twitch muscle fibers. J. Gen. Physiol. 85: 383-408 (1985). [PDF]
34.
35. Eisenberg, R.S. Membranes,
calcium, and coupling.
Theoretical Analysis and Modeling of Spread of Current:
36. Eisenberg, R.S. and Johnson, E.A. Three dimensional electrical field problem in physiology. Prog. Biophys. Mol. Biol. 20: 1-65 (1970). [PDF]
37. Eisenberg, R.S. and Engel, E. The spatial variation of membrane potential near a small source of current in a spherical cell. J. Gen. Physiol. 55: 736-757 (1970). [PDF]
38. Barcilon, V., Cole, J. and
Eisenberg, R.S. A singular perturbation analysis of induced
electric fields in nerve cells.
39. Eisenberg, R.S. and Costantin, L.L. The radial variation of potential in the transverse tubular system of skeletal muscle. J. Gen. Physiol. 58:700-701 (1971). [PDF]
40. Engel, E., Barcilon, V. and Eisenberg, R.S. The interpretation of current-voltage relationships from a spherical cell recorded with a single microelectrode. Biophys. J. 12: 384-403 (1972). [PDF]
41. Peskoff, A., Eisenberg, R.S. and Cole, J.D. Potential induced by a point source of current in the interior of a spherical cell. UCLA Engineering Report #7259, 62pp. (1972). [PDF]
42. Peskoff, A., Eisenberg, R.S. and Cole, J.D. Potential induced by a point source of current inside an infinite cylindrical cell. UCLA Engineering Report #7303, 70pp. (1973). [PDF]
43. Peskoff, A. and Eisenberg, R.S. Interpretation of some microelectrode measurements of electrical properties of cells. Ann. Rev. Biophysics. and Bioeng. 2: 65-79 (1973). [PDF]
44. Peskoff, A. and Eisenberg, R.S. A point source in a cylindrical cell: potential for a step-function of current inside an infinite cylindrical cell in a medium of finite conductivity. UCLA Engineering Report #7421, 73pp. (1974). [PDF]
45. Peskoff, A. and Eisenberg, R.S. The time-dependent potential in a spherical cell using matched asymptotic expansions. Journal of Math. Biol. 2: 277-300 (1975). [PDF]
46. Peskoff, A., Eisenberg,
R.S. and Cole, J.D. Matched asymptotic expansions of the Green’s function for
the electric potential in an infinite cylindrical cell.
47. Eisenberg, R.S., Barcilon, V., and Mathias, R.T. Electrical properties of spherical syncytia. Biophys. J. 25: 151-180 (1979). [PDF]
48. Mathias, R.T.,
Electrical Properties of Ionic Channels:
49. K.E. Cooper, Tang, J.M., Rae, J.L., and Eisenberg, R.S. A Cation Channel in Frog Lens Epithelia Responsive to pressure and Calcium. J. Membrane Biology. 93: 259-269 (1986). [PDF]
50. K.E. Cooper, P.Y. Gates, and Eisenberg, R.S. Surmounting barriers in ionic channels. Quart. Rev. Biophysics. 21: 331-364 (1988). [PDF]
51. K.E. Cooper, P.Y. Gates, and Eisenberg, R.S. Diffusion theory and discrete rate constants in ion permeation. J. Membrane Biol. 106: 95-105 (1988). [PDF]
52. J.M. Tang, J. Wang, and Eisenberg, R.S. K+ selective channel from sarcoplasmic reticulum of split lobster muscle fibers. J. Gen. Physiol. 94:261-278 (1989). [PDF]
53. P.Y. Gates, K.E. Cooper, J. Rae, and Eisenberg, R.S. Predictions of diffusion models for one ion membrane channels. in Progress in Biophysics and Molecular Biology. 53: 153-196 (1989). [PDF]
54. P.Y. Gates, K.E. Cooper, and Eisenberg, R.S. Analytical diffusion models for membrane channels. in Ion Channels, Volume 2 (editor. T. Narahashi), Plenum Press (1990). [PDF]
55. D. Junge and R.S. Eisenberg. Uniqueness and interconvertibility among membrane potassium channels. Comments on Theoret. Biology. 11: 45-55 (1990). [PDF]
56. Tang, J.M., Wang, J., F.N. Quandt, and R.S. Eisenberg. Perfusing pipettes. Pflügers Arch. 416:347-350 (1990). [PDF]
57. Chen, D.P., Barcilon, V., and R.S. Eisenberg. Constant
fields and constant gradients in open ionic channels. Biophysical J.
61:1372-1393 (1992). [PDF]
58. Barcilon, V., D.P. Chen, and R.S. Eisenberg. Ion
flow through narrow membrane channels. Part II.
59. Wang, J., Tang, J.M., and R.S. Eisenberg. A calcium conducting channel akin to a calcium pump. J. Membrane Biology 130:163-181 (1992). [PDF]
60. Barcilon, V., D.P. Chen, R. Eisenberg, and M. Ratner. Barrier crossing with concentration boundary conditions in biological channels and chemical reactions. J. Chem. Phys. 98(2) 1193-1211 (1993). [PDF]
61. Chen, D.P. and R.S. Eisenberg. Charges, currents, and potentials in ionic channels of one conformation. Biophysical Journal. 64:1405-1421 (1993a). [PDF]
62. Chen, D.P. and R.S. Eisenberg. Flux, coupling,
and selectivity in ionic channels of one conformation. Biophysical
Journal 65:727-746 (1993b). [PDF]
63. Hainsworth, A.H.,
64. Eisenberg, R.S., Klosek, M.M., and
Schuss, Z. Diffusion as a chemical reaction: stochastic trajectories between
fixed concentrations. J. Chem. Phys., 102(4): 1767-1780
(1995). [PDF]
and Revised Version [PDF]
65. Elber, R., Chen, D., Rojewska, D., and Eisenberg, R.S. Sodium in gramicidin: an example of a permion. Biophysical Journal, 68: 906-924, (1995). [PDF]
66. Chen, D., Eisenberg, R., Jerome, J., and Shu, C. Hydrodynamic model of temperature change in open ionic channels. Biophysical J. 69: 2304-2322. (1995). [PDF]
67. Barkai, E., Eisenberg, R.S., and Schuss, Z. (1996). A bidirectional shot noise in a singly occupied channel. (Physical Review E(2), 54 1161-1175). [PDF]
68. Chen, D., Lear, J., and Eisenberg, Bob. (1997) Permeation through an Open channel. Poisson-Nernst-Planck Theory of a Synthetic Ionic Channel. (Biophysical Journal, 72 97-116). [PDF]
69. Barcilon, V., Chen, D.-P.,
Eisenberg, R.S., and J.W. Jerome. (1997) Qualitative properties of steady-state
Poisson-Nernst-Planck systems: perturbation and simulation study.
70. Chen, D.; Xu, L.; Tripathy, A.; Meissner, G.; Eisenberg, B. (1997) Permeation through the Calcium Release Channel of Cardiac Muscle. with an appendix Rate Constants in Channology. Biophys. J. 73(3) 1337-1354. [PDF]
71. Nonner, W.; Chen, D.; Eisenberg, B. (1998) Anomalous Mole Fraction Effect, Electrostatics, and Binding. Biophys. J. 74 2327-2334. [PDF]
72. Nonner, W. and Eisenberg, B. (1998) Ion Permeation and Glutamate Residues Linked by Poisson-Nernst-Planck Theory in L-type Calcium Channels. Biophys. J. 75:1287-1305. [PDF]
73. Chen, D.; Xu, L.; Tripathy, A.; Meissner, G.; and Eisenberg, B. (1999) Selectivity and Permeation in Calcium Release Channel of Cardiac Muscle: Alkali Metal Ions. Biophysical Journal 76:1346-1366. [PDF]
74. Hollerbach, U., Chen, D.P.,
Busath,
75. Gardner, C., Jerome, J. and
R.S. Eisenberg (2000) Electrodiffusion Model of Rectangular Current Pulses in
Ionic Channels of Cellular Membranes.
76. Nonner, W., L. Catacuzzeno, and Eisenberg, B. (2000). Binding and Selectivity in L-type Ca Channels: a Mean Spherical Approximation. Biophysical Journal 79: 1976-1992. [PDF]
77. Hollerbach, U., Chen, D.P., and Eisenberg, B. (2001) Two and Three Dimensional Poisson-Nernst-Planck Simulations of Current Through Gramicidin-A. J. Scientific Computing 16 (4) 373-409. [PDF]
78. Gillespie, D. and
Eisenberg, R.S. (2001) Modified Donnan potentials for ion transport through
biological ion channels. Phys Rev E,
63 061902 1-8. [PDF]
79. Nonner, W., Gillespie, D., Henderson, D., and Eisenberg, Bob. (2001) Ion accumulation in a biological calcium channel: effects of solvent and confining pressure. J Physical Chemistry B 105: 6427-6436. [PDF]
80. Schuss, Zeev, Nadler, Boaz,
and Eisenberg, R.S. (2001) Derivation of PNP Equations in
81. Hess, K., Ravaioli, U., Gupta, M., Aluru, N., van der Straaten, T., and R.S. Eisenberg (2001) Simulation of Biological Ionic Channels by Technology Computer-Aided Design. VLSI Design 13: pp.179-187. [PDF]
82. Gillespie, Dirk, Nonner,
W., Henderson,
83. Gillespie, Dirk, and Eisenberg, Robert S. (2002). Physical descriptions of experimental selectivity measurements in
ion channels. European Biophysics Journal 31: 454-466). [PDF]
84. Gillespie, Dirk, Nonner, W., and Eisenberg, Robert S. (2002) Coupling Poisson-Nernst-Planck and Density Functional Theory to Calculate Ion Flux. Journal of Physics (Condensed Matter) 14: 12129–12145. [PDF]
85. Gardner, Carl L., Jerome, Joseph W., and Eisenberg. R.S. (2002) Electrodiffusion Model Simulation of Rectangular Current Pulses in a Voltage Biased Biological Channel. Journal of Theoretical Biology 219 291-299. [PDF]
86. Gardner, Carl L., Jerome, Joseph W., and Eisenberg. R.S. (2002) Electrodiffusion Model Simulation of Rectangular Current Pulses in a Biological Channel. J Computational Electronics, 1 347-351. [PDF]
87. van der Straaten, T.A., Tang, J., Eisenberg, R.S., Ravaioli, U., and Aluru, N.R. (2002) Three-dimensional continuum simulations of ion transport through biological ion channels: effects of charge distribution in the constriction region of porin. J. Computational Electronics 1 335-340 [PDF]
88. Boda, D., Busath, D., Eisenberg, B., Henderson, D., and Nonner, W. (2002) Monte Carlo Simulations of ion selectivity in a biological Na channel: charge-space competition. Physical Chemistry Chemical Physics 4 5154-5160. [PDF]
89. Hollerbach, Uwe and Robert Eisenberg. (2002) Concentration-Dependent Shielding of Electrostatic Potentials Inside the Gramicidin A Channel. Langmuir 18 3262-3631. [PDF]
90. Gillespie, D., Nonner, W. and RS Eisenberg. (2003) Crowded Charge in Biological Ion Channels Nanotech 3: 435-438. [PDF]
91. Nadler, B., Schuss, Z., Singer, A., Eisenberg, B. (2003) Diffusion through protein channels: from molecular description to continuum equations. Nanotech 3: 439-442. [PDF]
92. Wigger-Aboud, S., Saraniti, M. and R. Eisenberg. (2003) Self-consistent particle based simulations of three dimensional ionic solutions. Nanotech 3: 443-446. [PDF]
93. Aboud, S., Saraniti, M. and R. Eisenberg. (2003) Computational issues in modeling ion transport in biological channels: Self-consistent particle-based simulations. Journal of Computational Electronics 2: 239-243. [PDF]
94. van der Straaten, T., Kathawala, G., Kuang, Z., Boda, D., Chen, D.P., Ravaioli, U., Eisenberg, R.S., and Henderson, D. (2003) Equilibrium structure of electrolyte calculated using equilibrium Monte Carlo, Molecular Dynamics, and Transport Monte Carlo simulation. Nanotech 3: 447-451. [PDF]
95. Chen, D.; Xu, L.;
Eisenberg, B; and Meissner, G. (2003) Calcium Ion Permeation through the
Calcium Release Channel (Ryanodine Receptor) of Cardiac Muscle. J Phys Chem 107 9139-9145. [PDF]
96. Nadler, Boaz, Hollerbach, Uwe, Eisenberg, Bob. (2003) The Dielectric Boundary Force and its Crucial Role in Gramicidin. Phys. Rev. E 68 021905 p1-9. [PDF]
97. Gillespie, Dirk, Nonner,
Wolfgang, and Eisenberg, Robert S. (2003) Density functional theory of charged,
hard-sphere fluids. Phys Rev E 68
0313503 1-10. [PDF]
98. van der Straaten, T. A., Tang, J. M., Ravaioli, U., Eisenberg, R. S. and Aluru, N. (2003) Simulating Ion Permeation Through the OmpF Porin Ion channel Using Three-Dimensional Drift-Diffusion Theory. Journal of Computational Electronics 2: 29-47. [PDF]
99. Boda, Dezso, Varga, Tibor,
100. Gardner, Carl, Nonner,
Wolfgang, and Eisenberg, Robert S. (2004) Electrodiffusion Model Simulation of
Ionic Channels: 1D Simulations Journal of Computational Electronics 3:
25–31. [PDF]
101. Boda, Dezso, Gillespie, Dirk, Nonner, Wolfgang, Henderson,
102. Goryll, M., Wilk, S., Laws, G. M., Thornton, T. J., Goodnick, S. M., Saraniti, M., Tang, J. M. and R. S. Eisenberg (2003) Silicon-based ion channel sensor Superlattices & Microstructures 34(3-6), 451-457. [PDF]
103. Goryll, M., Wilk, S.,
Laws, G.M., Thornton, T. J., Goodnick, S. M., Saraniti, M., Tang, J. M. and R.
S. Eisenberg (2004) Ion Channel Sensor on a Silicon Support Mat. Res. Soc.
Symp. Proc. Vol. 820, O7.2.1-5. Proceedings Title:
Nanoengineered Assemblies and Advanced Micro/Nanosystems
104. Nadler, Boaz, Schuss, Zeev, Singer, Amit, and RS Eisenberg. (2004) Ionic diffusion through confined geometries: from Langevin equations to partial differential equations. J. Physics: Condensed Matter 16: S2153-S2165. [PDF]
105. Schuss, Zeev, B. Nadler, A. Singer, and R.S. Eisenberg, Models of boundary behavior of particles diffusing between two concentrations in Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems II editors: D. Abbot, S. M. Bezrukov, A. Der, A. Sanchez, 26-28 May 2004 Maspalomas, Gran Canaria, Spain, Spie proceedings series Volume 5467, pp. 345-358. [PDF]
106. Miedema, Henk, Anita Meter-Arkema, Jenny Wierenga, John Tang, Bob Eisenberg, Wolfgang Nonner, Hans Hektor, Dirk Gillespie and Wim Meijberg (2004) Permeation properties of an engineered bacterial OmpF porin containing the EEEE-locus of Ca2+ channels. Biophysical Journal Volume 87 3137–3147. [PDF]
107. Aboud, S., Marreiro, D., Saraniti, M., and R. Eisenberg. (2004) A Poisson P3M Force Field Scheme for Particle-Based Simulations of Ionic Liquids. J. Computational Electronics, 3: 117–133. [PDF]
108. Wilk, Seth, Goryll,
Michael, Laws, Gerard M., Goodnick, Stephen M., Thornton, Trevor J., Saraniti,
109. Nadler, Boaz, Schuss, Zeev, Hollerbach, Uwe, R.S. Eisenberg. (2004)
Saturation of conductance in single ion channels: the blocking effect of the
near reaction field. Phys Rev E 70,
051912. [PDF]
110. Nonner, Wolfgang, Peyser, Alexander, Gillespie, Dirk, and Bob Eisenberg. (2004) Relating microscopic charge movement to macroscopic currents: the Ramo-Shockley theorem applied to ion channels. Biophysical Journal, 87: 3716-22. [PDF]
111. Singer, A., Schuss, Z., Nadler, B., and RS Eisenberg (2004) Memoryless control of boundary concentrations of diffusing particles Phys Rev E 70, 061106. [PDF]
112. van der Straaten, Trudy A., Kathawala, G. Trellakis, A., Eisenberg, R.S., Ravaioli, U. (2005) BioMOCA — a Boltzmann transport Monte Carlo model for ion channel simulation. Molecular Simulation, 31: 151-171. [PDF]
113. Aguilella-Arzo, Marcel, Aguilella, Vicente and R. S. Eisenberg (2005) Computing numerically the access resistance of a pore European Biophysics Journal, 34: 314-322. [PDF]
114. Aboud, Shela, Marreiro,
David, Saraniti,
115. Marreiro, David, Aboud,
Shela, Saraniti,
116. Singer, Amit, Schuss, Zeev, and R. S. Eisenberg. (2005) Attenuation of the electric potential and field in disordered systems J. Stat. Phys. 119 (5/6) 1397-1418. [PDF] Posted on http://arxiv.org as arXiv:cond-mat/0501048
117. Boda, D., Gillespie, D.,
Eisenberg, B., Nonner, W., Henderson, D. (2005) Induced Charge Computation
Method: Application in Monte Carlo simulations of inhomogeneous dielectric
systems p. 19–43.in D. Henderson et
al. (eds.), Ionic Soft Matter: Modern Trends in Theory and Applications,
Springer NY. [PDF]
118. Singer, Amit, Schuss, Zeev, Holcman, David and R. S. Eisenberg. (2006) Narrow Escape. Part I, J. Stat. Phys. 122, 437-463. [PDF] Posted on http://arxiv.org with Paper ID arXiv:math-ph/0412048
119. Siwy, Zuzanna, Powell, Matthew R., Kalman, Eric, Astumian, R. Dean, Eisenberg, Robert S. (2006) Negative Incremental Resistance Induced by Calcium in Asymmetric Nanopores. Nano Letters 6, 473-477. [PDF]
120.
Miedema, Henk, Vrouenraets, Maarten, Wierenga, Jenny, Eisenberg, Bob, Schirmer, Tilman,
Baslé, Arnaud and Wim Meijberg. (2006) Conductance
and selectivity fluctuations in D127 mutants
of the bacterial porin OmpF. European
Journal of Biophysics, 36 13-22. [PDF]
121.
Siwy, Zuzanna, Powell, Matthew R., Petrov, Alexander, Kalman, Eric, Trautmann,
Christina, and Eisenberg, Robert S. (2006)
Calcium-Induced Voltage Gating in Single Conical Nanopores. Nano
Letters 6, 1729 -1734. [PDF]
122.
Boda, Dezső, Valisko,
Monika, Eisenberg, Bob, Nonner, Wolfgang, Henderson,
123.
Miedema, Henk, Vrouenraets, Maarten, Wierenga, Jenny, Gillespie, Dirk,
Eisenberg, Bob, Meijberg, Wim and
124. Eisenberg, Bob, Nonner, Wolfgang (2007)
Shockley-Ramo Theorem Measures Conformation Changes of Ion Channels and
Proteins. J Computational Electronics
6:363-345. [PDF]
125.
Eisenberg, Bob, Liu, Weishi (2007) Poisson-Nernst-Planck systems for ion
channels with permanent charges.
126.
Burger, Martin, Eisenberg, Robert S. and Heinz Engl (2007) Inverse Problems
Related to Ion Channel Selectivity.
127. Boda, Dezso, Valisko, Monika, Eisenberg,
Bob, Nonner, Wolfgang, Henderson,
128.
Boda, Dezső, Nonner, Wolfgang, Valisko, Mónika,
Henderson,
129. Wilk, S.J., Petrossian, L., Goryll M., Thornton, T.J., Goodnick, S.M., Tang, J.M., Eisenberg R.S. (2007) Integrated Electrodes on a Silicon Based Ion Channel Measurement Biosensors and Bioelectronics Volume 23, Issue 2, 30 September 2007, Pages 183-190. doi:10.1016/j.bios.2007.03.030 [PDF]
130.
Miedema, Henk Vrouenraets, Maarten Wierenga, Jenny Meijberg, Wim, Robillard, George and
131. Boda, Dezső, Nonner, Wolfgang, Henderson,
132.
Roth, Roland, Gillespie, Dirk, Nonner, Wolfgang, Eisenberg, Bob. (2008) Bubbles, gating and anesthetics in ion channels.
Biophysical Journal Volume 94 4282–4298 published online as January 30, 2008
as BioFAST, doi:10.1529/biophysj.107.120493
[PDF] note misprint in middle initial of RSE
in print edition.
133. Powell, Matthew; Sullivan, Michael; Vlassiouk, Ivan; Constantin, Dragos; Sudre, Olivier; Martens, Craig, Eisenberg, Robert; and Siwy, Zuzanna (2008) Nanoprecipitation Assisted Ion Current Oscillations. Nature Nanotechnology 3, 51 - 57 (01 Jan 2008), doi: 10.1038/nnano.2007.420. [PDF]
134. Eisenberg, Bob. (2008). Bubble Gating Currents in Ionic Channels. Posted on http://arxiv.org with Paper ID arXiv:0802.0308v1 [q-bio.BM]. [PDF]
135. Singer, A. Gillespie, D., Norbury J., and Eisenberg, R.S. (2008) Singular perturbation analysis of the steady state Poisson-Nernst-Planck system: applications to ion channels. European Journal of Applied Mathematics vol. 19, pp. 541–560. [PDF]
136. Abaid, Nicole, Eisenberg, R.S.,
Liu, Weishi. (2008) Asymptotic expansions of I-V relations via a
Poisson-Nernst-Planck system. SIAM Journal of Applied Dynamical Systems. 7 1507-1526. [PDF]
137. Boda, Dezső, Valisko, Monika, Henderson,
138. Boda, Dezső, Valisko, Monika, Henderson, Douglas, Eisenberg, Bob, Gillespie, Dirk, and Wolfgang Nonner. (2009) Ionic selectivity in L-type calcium channels by electrostatics and hard-core repulsion. Cover of Journal of General Physiology [COVER] and 133 p. 497-509. [PDF]
139. He, Yan, Gillespie, Dirk, Boda, Dezső, Vlassiouk Ivan, Eisenberg, Robert S., and Zuzanna S. Siwy. (2009) Tuning transport properties of nanofluidic diodes with local charge inversion Journal of the American Chemical Society 131 (14), pp 5194–5202. [PDF]
140.
Bardhan, Jaydeep P., Eisenberg, Robert S., and Dirk Gillespie. (2009)
Discretization of the Induced-Charge Boundary Integral Equation. Physical
Review E. 80,
011906. [PDF]
141. Luchinsky, D. G., Tindjong, R.,
Kaufman, I., McClintock, P.V.E., and R.S. Eisenberg. (2009) Self-consistent
analytic solution for the current and the access resistance in open ion
channels. Physical Review E 80, 021925. [PDF]
142. Malasics, Attila, Gillespie, Dirk,
Nonner, Wolfgang, Henderson, Douglas; Eisenberg, Bob, Boda, Dezső.
(2009) Protein structure and ionic selectivity in calcium channels: Selectivity
filter size, not shape, matters. Biophysica and Biochimica Acta:
Biomembranes Biochimica et Biophysica Acta 1788, 2471–2480. [PDF]
143. Luchinsky, D. G., Tindjong, R., Kaufman, I., McClintock, P.V.E., and R.S. Eisenberg. (2009) Charge fluctuations and their effect on conduction in biological ion channels. Journal of Statistical Mechanics: Theory and Experiment. P01010. doi:10.1088/1742-5468/2009/01/P01010
144.
Knepley, Matthew G., Karpeev, Dmitry A., Davidovits, Seth, Eisenberg, Robert
S., and Dirk Gillespie. (2010) An efficient algorithm
for classical density functional theory in three dimensions. Journal of
Chemical Physics 132, 124101-1 to 124101-11.
[PDF] Posted on http://arxiv.org/ with PaperID arXiv:0910.1531.
145.
Zhang, Chao; Raugei, Simone, Eisenberg, Robert, and
Paolo Carloni. (2010) Molecular Dynamics in Physiological Solutions:
Force-fields, Alkali Metal Ions, and Ionic Strength. Journal
of Chemical Theory and Computation. 6:2167-2175. [PDF]
146. Eisenberg,
Bob, Hyon, YunKyong, and Chun Liu. (2010). Energy Variational Analysis EnVarA
of Ions in Water and Channels: Field Theory for Primitive Models of Complex
Ionic Fluids. Journal of Chemical Physics. 133, 104104 [PDF]
147. Hyon,
YunKyong, Eisenberg, Bob and Chun Liu. (2010). A mathematical
model of the hard sphere repulsion in ionic solutions. Communications in
Mathematical Sciences (in the press)
[PDF]
148. Eisenberg, Bob. (2010) Multiple Scales in the Simulation of Ion Channels and Proteins Journal of Physical Chemistry B Mark Ratner Festschrift, December 2010, [PDF] (in the press) On Line Version 10.1021/jp106760t
Reviews,
mostly invited:
1. †Eisenberg, R.S. The equivalent circuit of frog skeletal muscle. (1971) In: Contractility of Muscle Cells (Ed. R. Podolsky) Prentice Hall, p. 73-88. [PDF]
2. †Eisenberg, R.S.
and Mathias, R.T. (1980) Structural analysis of electrical properties. Critical
Reviews in Bioengineering 4: 203-232. [PDF]
3. Eisenberg, R.S. Structural Complexity, Circuit Models, and Ion Accumulation. (1980) Fed. Proc. 39: 1540-1543. [PDF]
4. Mathias, R.T., R.A. Levis,
and R.S. Eisenberg. (1981) An alternative
interpretation of charge movement in muscle. In: The Regulation of Muscle Contraction: Excitation-Contraction Coupling. Ed. A. D.
Grinnell & M.A.B. Brazier, Academic Press,
5.
Eisenberg, R.S. (1983) Impedance Measurement of the Electrical Structure of
Skeletal Muscle. In: Handbook of
Physiology, Section 10: Skeletal Muscle, Ed. L.D. Peachey American
Physiological Society, pp 301-323. [PDF]
6. †Eisenberg, R.S. (1984) Membranes and Channels. Physiology and Molecular Biology, pp. 235-283. In: Membranes, Channels, and Noise, Eds. R.S. Eisenberg, M. Frank, and C.F. Stevens, Plenum Press, NY. [PDF]
7. Eisenberg, R.S. (1986) Electrical field problems in muscle and their meaning to mathematicians, physiologists, and muscle. in: Some Mathematical Questions in Biology - Muscle Physiology. Lectures on Mathematics in the Life Sciences, Vol. 16. Ed., Robert M. Miura, American Mathematical Society, Providence, Rhode Island, 16: 223-234. [PDF]
8. †Eisenberg, R.S.
(1987) Impedance measurements as estimators of the properties of the
extracellular space.
9. †Rae, J.L.,
10. †Eisenberg, R.S. Channels as Enzymes. J. Memb. Biol., 115, 1-12 (1990). [PDF] Published August 1, 2008, posted on http://arxiv.org with Paper ID in ArXiv as arXiv:0808.0130 [PDF]
11. †Tang, J.M., Wang, J., and Eisenberg, R.S. (1992) Studies on intact sarcoplasmic reticulum: patch clamp recording and tension measurement in lobster split muscle fibers. in Ion Channels (ed.’s B. Rudy and L.E. Iverson), a volume of Methods in Enzymology. [PDF]
12. †Tang, J.M.,
Wang, J., and Eisenberg, R.S. (1992) Perfusing patch pipettes, easily and
quietly. in Ion Channels (ed.’s B. Rudy and L.E.
Iverson), 207: 176-180 Methods in
Enzymology. [PDF]
13. †Tang, J.M., F.N. Quandt, and R.S. Eisenberg. Perfusion of Patch Pipettes. (1995) in Patch Clamp Techniques and Protocols. (p.123-140) ed.’s: A.A. Boulton, hG.B. Baker, and W. Walz. Humana Press. [PDF]
14. †Eisenberg, R.S. (1996a)
Atomic Biology, Electrostatics and Ionic Channels.
15. Eisenberg, R.S. (1996b). Computing the field in proteins and channels. J. Membrane Biol. 150:1-25. [PDF] Posted on http://arxiv.org/ with PaperID arXiv:1009.2857 [q‑bio.BM], September 15, 2010.
16. Eisenberg, Bob (1998). Ionic channels in biological membranes. Natural nanotubes. Accounts of Chemical Research 31:117-125. [PDF]
17. Eisenberg, Bob (1998). Ionic Channels in Biological Membranes: Natural Nanotubes described by the Drift-Diffusion Equations. (Invited by and accepted by VLSI Design) Proceedings of the Fifth International Workshop on Computational Electronics. 8:75‑78. [PDF]
18. Eisenberg, Bob (1998). Ionic channels in biological membranes. Electrostatic analysis of a natural nanotube. Contemporary Physics, 39 (6) 447-466. [PDF]
19. Nonner, Wolfgang, Chen, Duan, and Bob Eisenberg. (1999). Progress and prospects in permeation. Journal of General Physiology 113: 773-782. [PDF]
20. Eisenberg, R.S. (1999). From Structure to Function in Open Ionic Channels. Journal of Membrane Biology 171 1-24. [PDF]
21. Nonner, Wolfgang, and Bob Eisenberg. (2000) Electrodiffusion in Ionic Channels of Biological Membranes. Journal of Molecular Liquids 87:149-162. [PDF]
22. Eisenberg, Bob. (2000). Permeation as a Diffusion Process. Chapter 4 in Biophysics Textbook On Line “Channels, Receptors, and Transporters” Louis J. DeFelice, Volume Editor. Location Updated on November 18, 2005 [PDF] Published July 5, 2008 in http://arxiv.org with Paper ID arXiv:0807.0721. [PDF] Original Biophysical Society publication is found at Original and Original 2.
23. Eisenberg, R. (2000) Ionic channels: natural nanotubes described by the drift diffusion equations. Superlattices and Microstructures. 27 (5/6) 545-549. [PDF]
24. Eisenberg, Bob (2003)
Proteins, Channels, and Crowded Ions Biophysical Chemistry 100: 507 - 517. [Edsall Memorial
Volume] [PDF]
24a. Eisenberg, Bob (2003) Erratum to
``Proteins, channels and crowded ions'', Biophysical Chemistry 106 p.93.
[N.B.,
note misprint in title of Erratum in initial, i.e., left quotation marks!]
[PDF]
25. Schuss, Zeev, Nadler, Boaz, Singer, Amit, and Eisenberg, Robert S. Eisenberg. (2002) A PDE formulation of non-equilibrium statistical mechanics for ionic permeation, AIP Conference Proceedings 665, Washington, DC, 3-6 September 2002: Unsolved Problems Of Noise And Fluctuations, UPoN 2002, 3rd International Conference on Unsolved Problems of Noise and Fluctuations in Physics, Biology, and High Technology (S.M. Bezrukov, ed.), p.312, Washington, DC. [PDF]
26. Eisenberg, Bob. (2002) Ionic channels as natural nanodevices. J. Computational Electronics 1 331-334. [PDF]
27. Eisenberg, Bob (2003) Ion channels as devices. J. Computational Electronics 2 245-249. [PDF]
28. Eisenberg, Bob (2005)
Living Transistors: a Physicist’s View of Ion Channels. Posted on http://arxiv.org/ with PaperID arXiv:q-bio/0506016v2 [q-bio.BM], June 14, 2005. version
2 Aug 25, 2005, posted Feb 3 2008. [PDF]
29. Saraniti,
30. Eisenberg, Bob. (2008) Ion channels allow atomic control of macroscopic transport. Physica Status Solidi (c) 5, 708–713 (2008) /DOI 10.1002/pssc.200777556. [PDF]
31. Eisenberg, Bob. (2010). Crowded Charges in Ion Channels. Advances in Chemical Physics (Stuart Rice, Editor), in the press. Posted on http://arxiv.org/ with PaperID arXiv:1009.1786v1 [q-bio.BM] September 9, 2010. [PDF]
Everything Else:
1. Eisenberg, R.S. (1975)
Electrophysiology. A review of Electric Current Flow in Excitable Cells. J.B. Jack, D. Noble
and R.W. Tsien. Clarendon (Oxford University Press),
2. Eisenberg, R.S. (1973)
Studies of Biomembranes. Book review of Perspective in Membranes. A Tribute to Kenneth S. Cole, D.P. Agin
(Ed.)
3. Eisenberg, R.S. (1982) Book
review of The Biophysical Approach to
Excitable Systems. Eds. W.J. Adelman, Jr. and D.E. Goldman, Plenum,
4. Eisenberg, R.S. (1987)
Gating Current. Encyclopedia of
Neuroscience, Birkhauser,
5. Eisenberg, R.S. (1987) Ionic
Channels in Membranes. Encyclopedia
of Neurosciences. Birkhauser,
6. Eisenberg, R.S. (1987)
Structural Complexity in Nerve Cells. Encyclopedia
of Neuroscience, Birkhauser,
7. Eisenberg, R.S. (1987) Volumes apart. Nature. Scientific Correspondence on a paper of Zimmerberg and Parsegian. 325: 114. [PDF]
8. Eisenberg, R.S. (1990) Complexities in solution. Trends in Biochemical Sciences, 15:51, A Letter concerning a paper of Payne and Rudnick. [PDF]
9. Eisenberg, RS. (1992) A unified theory of membrane transport. in Harvard
Class of 1962. Thirtieth
Anniversary Report.
10. Eisenberg, R.S. (1993) Popper, Wolpert, and Critics. Nature 361 292. [PDF]
11. Bertl, A., Blumwald, E., Coronado, R., Eisenberg, R., Findlay, G., Gradmann, D., Hille, B., Köhler, K., Kolb, H., MacRobbie, E., Meissner, G., Miller, C. Neher, E., Palade, P. Pantoja, O., Sanders, D., Schroeder, J., Slayman, C., Spanswick, R., Walker, A., and Williams, A. (1992) Electrical measurements on endomembranes. Science 258: 873-874. [PDF]
12. Chen, D.; Xu, L.; Tripathy, A.; Meissner, G.; Eisenberg, B. (1997) Rate Constants in Channology. Appendix to Permeation through the Calcium Release Channel of Cardiac Muscle. Biophys. J. 73 1337-1354. [original paper is also cited in this CV] [PDF]
13. Eisenberg, Bob (2000)
Vignette Applications of Physical Chemistry, a Biological Example. in
14. Eisenberg, Bob (2003) Why can’t protons move through ion channels? Biophysical Journal 85 3427-3428. [PDF]
15. Tindjong, R,. Applegate, A., Eisenberg, R.S. Kaufman,
16. Patent
Application, PCT/NL2003/000013
Liquid Based Electronic Device (from BioMade,
17. Tindjong, R, Eisenberg,
R.S. Kaufman,
18. Eisenberg, Bob (2005). Validating the need to validate code. Physics Today (Letter
to the
19.
Eisenberg, Bob (2006). The value of Einstein’s mistakes.
“Einstein should be allowed his mistakes …” Physics Today (Letter to the
20. Eisenberg, Bob (2007). New and Notable: Mechanical Spikes from Nerve Terminals. Biophysical Journal 92 p. 2983. [PDF]
21. Eisenberg, R.S. (2007) Look at biological systems through an engineer’s eyes. Nature Vol 447, p. 376. [PDF]
22. Patent Application, Mathematical Design of Ion Channel
Selectivity via Inverse Problems Technology (with Heinz Engl and Martin Burger,
from
23. Eisenberg, Bob. (2008) Understanding Life with Molecular Dynamics and Thermodynamics: Comment on Nature 451, 240-243 (2008). Posted on http://arxiv.org with Paper ID arXiv:0802.2244v2 [q-bio.BM] [PDF]
24.
Eisenberg, B. (2008) Engineering channels: Atomic biology Proc. Natl. Acad.
Sci. U. S. A. 2008 105: p. 6211-6212. [PDF]
25. Eisenberg, B. (2008) Letter to the Editor. New York Times, May 15, p. A30. [PDF]
26.
Luchinsky, D.G., Tindjong, R., Kaufman,
27. Eisenberg, B. (2008) Ionic Selectivity in Channels:
complex biology created by the balance of simple physics. Nanotechnology 501
Lecture Series: Purdue University.:
28. Eisenberg, B. (2009). Self organized model of selectivity. Available online from Institute for Mathematics and its Applications (IMA) University of Minnesota at Self-Organizd IMA link and on http://arxiv.org with Paper ID http://arxiv.org/abs/0906.5173 [PDF]
29. Eisenberg, B. (2010). Ion Channels and Selectivity. Kavli Institute of Theoretical Physics. University of California Santa Barbara. Seminar Slides on-line at http://online.kitp.ucsb.edu/online/evocell10/eisenberg
30. Bardhan, Jaydeep P., Leaf, Gary K.
and Bob Eisenberg. (2010) Reproducible Estimation of Osmotic Coefficients Using
the Inverse Monte Carlo Method. Argonne National Laboratory Mathematics and
Computer Science Preprint ANL-MCS P1764-0610
[PDF]
31. Eisenberg, Bob. (2010) CSO Deserves
Immense Credit. Letter to the Editor, Chicago Tribune, June 4. [PDF]
32. Eisenberg, Bob, Hyon, YunKyong, and
Chun Liu. (2010) Energy variational analysis EnVarA of ions in water and
channels: Field theory for primitive models of complex ionic fluids, Preprint# 2317 of the reprint series of the
Institute for Mathematics and its Applications (IMA, University of Minnesota,
Minneapolis) http://www.ima.umn.edu/preprints/jun2010/jun2010.html
[PDF]
Nearly identical to paper 146.
33. Hyon, YunKyong, Eisenberg, Bob, and Chun
Liu. (2010) A mathematical model for the hard sphere repulsion in ionic
solutions Preprint# 2318 of the reprint series of the Institute for Mathematics
and its Applications (IMA, University of Minnesota, Minneapolis) http://www.ima.umn.edu/preprints/jun2010/jun2010.html
[PDF]
Books:
1. Eisenberg, R.S., M. Frank, and C.F. Stevens (eds.) (1984) Membranes, Channels, and Noise. Plenum Press, NY, pp. 1-54.
Abstracts:
1. Eisenberg, R.S. and Gage, P.W. (1968) Electrical properties of frog skeletal muscle fibers with disrupted transverse tubules. Biophys. J. 8: A-188.
2. Eisenberg, R.S. and Eisenberg, B. (1968) The extent of disruption of the transverse tubular system in glycerol treated skeletal muscle. Federation Proceedings 27: 247.
3. Eisenberg, R.S. and Gage, P.W. (1968)The surface and tubular membranes of frog sartorius muscle fibers. J. Cell Biol. 39: 39a .
4. Eisenberg, R.S. and Gage, P.W. (1969) The conductance of the surface and tubular membranes of frog sartorius muscle. Biophys. J. 9: A99.
5. Eisenberg, R.S. and Johnson, E.A. (1969) The interpretation of potentials recorded with double-barrel microelectrodes or with a single electrode bridge. Federation Proceedings 28: 397.
6. Howell, J., Vaughan, P. and Eisenberg, R.S. (1970) Maintenance of resting potentials in glycerol treated muscle fibers. Biophys. J. 10: 75a.
7. Howell, J., Vaughan, P. and Eisenberg, R.S. (1970) Changes in the capacitance of frog skeletal muscle. Federation Proceedings 29: 656.
8. Eisenberg, R.S. (1972) The electrical properties of the internal membrane structures of skeletal muscle. J. Physiol. Soc. Japan. 34:90.
9. Valdiosera, R., Clausen, C. and Eisenberg, R.S. Impedance of frog skeletal muscle fibers. (1973) Biophys. Soc. Abst. 195a.
10. Mobley, B.A., Leung, J. and Eisenberg, R.S. (1974) Longitudinal Impedance of skinned frog muscle fibers. Federation Proceedings 33: 401.
11. Peskoff, A. and Eisenberg, R.S. (1974) Influence of extracellular resistance on membrane potential of cells. Federation Proceeding 33: 1266.
12. Mathias, R.T., Clausen, C. and Eisenberg, R.S.(1975) Mesh model of the electrical properties of the tubular system of skeletal muscle. The Physiologist, 18: August.
13. Clausen, C.,
14. Eisenberg, R.S., Barcilon, V. and Mathias, R.T. (1978) Electrical properties of a spherical syncytium. Biophys. J. 21: 48a..
15. Mathias, R.T., Rae, J. and
Eisenberg, R.S. (1978) Linear electrical properties of
the lens of the eye. Biophys. J. 21:
48a.
16. Eisenberg, B.R. and Eisenberg, R.S. (1980) T-SR Junction in activated muscle. J. Cell. Biol. 87: 264a.
17. Eisenberg, R.S. Structural analysis of electrical properties. (1981) Biophys. J. 33: 267a,.
18. Eisenberg, R.S., Mathias, R.T., and J.L. Rae. (1982) Series resistance measured by integrals of transients. Biophys. J. 37: 63a.
19.
20. Hui, C.S.,
21. McCarthy, R.T.,
22.
23. Curtis, B.A. and Eisenberg, R.S. A delayed calcium influx related to contraction in frog twitch fibers. (1984) J. Gen. Physiol. 84: 36a.
24. Cooper, K.E., McCarthy,
R.T.,
25. Eisenberg, R.S., Curtis, B.A. and McCarthy, R.T. (1984) Calcium uptake and K+ contractures in paralyzed and contracting muscle fibers. Biophys. J. 45: 234a.
26. Eisenberg, R.S. Structural analysis of neuronal integration. (1984) Biophys. J. 45: 153a.
27. Curtis, B.A. and Eisenberg, R.S. (1984) A delayed influx related to contraction in frog twitch fibers. J. Gen. Physiol. 84: 36a.
28. Curtis, B.A. and Eisenberg,
R.S. (1985) Calcium entry and the repriming period of frog twitch fibers. Biophys. J. 47: 132a.
29. Eisenberg, R.S. Calcium Signals in Muscle. (1985) Biophys. J. 47: 194a.
30. Curtis, B.A. and Eisenberg, R.S. (1985) Calcium ions: The link between t depolarization and SR Ca release. Biophys. J. 47: 195a.
31. Cooper, K.E., J.M. Tang, J.L. Rae and R.S. Eisenberg. (1985) Cation selective channel in the epithelium of frog lens. Biophys. J. 86: 9a.
32. Cooper, K.E., J.M. Tang, J.L. Rae and R.S. Eisenberg. (1985) Cation-selective channel in the epithelium of frog lens. J. Gen. Physiol. 86: 9a-10a.
33. Cooper, K.E., J.M. Tang, J.L. Rae and R.S. Eisenberg. (1986) A cation-selective channel from frog lens epithelium. Biophys. J. 49: 6a.
34. Cooper, K.E., Gates, P.Y., and R.S. Eisenberg. (1987) Rate constants for ionic diffusion over barriers. Biophys. J. 51: 48a.
35. Gates, P.Y., Cooper, K.E.,
and R.S. Eisenberg. (1987) Diffusive flux through ionic
channels. Biophys. J. 51: 48a.
36. Tang, J. M., Wang, J., and R.S. Eisenberg. (1987) Patch clamp of sarcoplasmic reticulum within muscle fibers. Biophys. J. 51: 106a.
37. Eisenberg, R.S.,
Hainsworth, A.H., and R.A. Levis. (1987). Open-channel noise
in a cation channel of the frog lens epithelium. J. Physiol. (
38. Hainsworth, A., Tang, J.M.,
Wang, J.,
39. Cooper, K.E., Gates, P.Y., and R.S. Eisenberg. (1988) Diffusion theory and discrete rate constants in ion permeation. Biophys. J. 152a.
40. Moghaddamjoo, A.,
41. R.S. Eisenberg. Channels as Enzymes (title only). (1988) Medical Physics 15: No. 4, p. 440.
42. J. Wang, J.M. Tang, and R.S. Eisenberg. (1989) Ca++ channels in the sarcoplasmic reticulum (SR) of skinned lobster muscle fibers: patch clamp measurements. J. Cell Biology 107:144a.
43. R.S.
Eisenberg, A.H. Hainsworth, and R.A. Levis. Open-channel
noise in the potassium channel of lobster sarcoplasmic reticulum. (1988)
J. Physiol. (
44. J. Wang, J.M. Tang, and R.S. Eisenberg. Ca++ channels from sarcoplasmic reticulum of split lobster muscle fibers. (1989) Biophysical J. 55: 207a.
45. A. Hainsworth, R.A. Levis, and R.S. Eisenberg. (1989) Excess open-channel noise in the SR K+ channel. Biophysical J. 55: 200a.
46. R.S. Eisenberg, A.H. Hainsworth, R.A. Levis. (1989) The effect of temperature on open-channel noise in the potassium channel of the lobster sarcoplasmic reticulum. J. Physiol. 410: 18P.
47. J.M. Tang, J. Wang, F.N. Quandt, and Eisenberg, R.S. (1990) Perfusing patch pipettes quietly and easily. Biophys. J. 57: 171a.
48. J.M.
Tang, J. Wang, T. Lea and Eisenberg, R.S. (1990) Contractures and reloading in
skinned lobster muscle fibers. Biophys. J. 57: 171a.
49. R.S. Eisenberg, J.M. Tang, and J. Wang. (1991) Ionic channels of
the sarcoplasmic reticulum of lobster remotor muscle. Biophys. J. 59: 177a.
50. D.P. Chen and R.S. Eisenberg. (1991) Constant
fields and constant gradients in open ionic channels. Biophys. J. 59: 404a.
51. R.S. Eisenberg, D.P. Chen, and V. Barcilon. (1991) Constant fields and constant gradients in open ionic channels. Physiologist. 34: 102.
52. Wang, J., Tang, J.M., and RS Eisenberg. (1992) Calcium conducting channel in SR: calcium pump without occlusion? Biophys. J. 61. A433.
53. Chen, DP, Barcilon, V. and RS Eisenberg. (1992) Induced and permanent charge in open ionic channels. Biophys. J. 61. A11.
54. Chen, DP, and R Eisenberg. (1992) Exchange diffusion, single filing, and gating in macroscopic channels of one conformation. J. Gen. Physiol. 100: 9a.
55. Eisenberg, Robert From Structure to Permeation in Open Ionic Channels. (1993) Biophys. J. 64:A22.
56. Eisenberg, Robert and Duanpin Chen. (1993)
Poisson-Nernst-Planck (PNP) theory of an open ionic
channel. Biophys. J. 64:A22. [PDF]
57. Chen, Duanpin and Robert Eisenberg. (1993) Poisson-Nernst-Planck (PNP) theory of open ionic channels. Biophys. J. 64:A22. [PDF]
58. Chen, Duan P. and Robert S.
Eisenberg. (1994) Divalent effects on mono-valent cation channels, an extension
of Poisson-Nernst-Planck theory. Biophys.
J. 66(2) A292.
59. Elber, Ron, Duan Chen, Danuta Rojewska, and
60. Eisenberg, Bob, Malgorzata
Klosek, and Zeev Schuss. (1994) Stochastic theory of
the open channel. Biophys. J. 66(2)
A354.
61. Chen, Duan, Paul Kienker, Jim Lear and
62. Chen, Duan, Wolfgang Nonner, and
63. Chen, D., Eisenberg, R.,
Jerome, J., and Shu, C. (1995) PH
(Poisson-Hydrodynamic) Theory of an open channel. Biophys.
J., 68:A371.
64. Tang, John, Rick Levis,
Kelvin Lynn, and
65. Janovic, Slobidan, Kelvin
Lynn, Xaioye Wu,
66. Eisenberg, Robert S., Chen, P. Solutions to Fields in Biological Channels. (1996) American Chemical Society, Division of Physical Chemistry, 212th Meeting. Printed but perhaps not published Abstract.
67. Chen, D., Xu, L., Tripathy, A., Meissner, G., and R. Eisenberg (1997) Permeation through the calcium release channel (CRC) of cardiac muscle. Biophys. J., 72:A108.
68. Tang, J., Chen, D., Saint, N., Rosenbusch, J., and R. Eisenberg (1997). Permeation through porin and its mutant G119D. Biophys. J., 72:A108, 1997.
69. Tang, J., Saint, N., Rosenbusch, J., and R. Eisenberg (1997). Currents through single channels of maltoporin. Biophys. J., 72:A108, 1997.
70. Gardner, Carl, Eisenberg, B., and Joe Jerome. (1998) Numerical simulation of rectangular channel currents. Biophys. J., 74 A342.
71. Schuss, Zeev and Eisenberg, B. (1998) Stochastic and continuum models of unidirectional fluxes in open ionic channels. Biophys. J., 74 A342.
72. Elber, R. and Eisenberg, B.
(1998) Molecular dynamics simulations of solvated ions between a membrane and
metal electrodes at various electric potentials. Biophys. J., 74 A342.
73. Chen, D., Tripathy, A., Xu, L., Meissner, G. and
74. Chen, D., Tripathy, A., Xu, L., Meissner, G. and
75. Nonner, W., Chen, D. and
76. Nonner, W. and
77. Catacuzzeno, L., W. Nonner, and B. Eisenberg. (1999) PNP2 Links Crystallographic Structure and Conduction in K Channels. Biophysical Journal. 76:A79.
78. Gillespie, D, and
79. Hollerbach, U., Chen, D., Nonner, W., and
80. Catacuzzeno, L., W. Nonner, L. Blum, and B. Eisenberg. Ca Selectivity in the ‘EEEE’ Locus of L-type Ca Channels. (1999) Biophysical Journal. 76:A259.
81. Nonner, W, L. Catacuzzeno, and B. Eisenberg. (2000) Ionic selectivity in K channels. Biophysical Journal. 78:A96.
82. Nonner, W, L. Catacuzzeno,
and B. Eisenberg. (2000) Ionic selectivity in calcium
channels. Biophysical
Journal. 78:A455.
83. Chen, Duan,
84. van der
Straaten, T.A., RS Eisenberg, JM Tang, U Ravaioli, and
85. Chen, Duan, L Xu, B Eisenberg, and G Meissner. (2001) Ca ion permeation through the calcium release channel (ryanodine receptor) of cardiac muscle Biophysical Journal. 50: 115a.
84. Nonner, W., B Eisenberg, and D Henderson (2001) Ca channel selectivity: the role of solvent Biophysical Journal. 80:453a.
85. Nonner, W., Gillespie, D., and B Eisenberg. (2002) Flux and selectivity in the Ca channel: a density functional approach. Biophysical Journal. 82: 340a.
86. Gillespie, D. and RS Eisenberg. (2002) Measurements of selectivity: physical interpretation. Biophysical Journal. 82:206a.
87. Van der Straaten, T.A., Tang, J.M., Eisenberg, RS, Ravaioli, U., Aluru, N., Varma, S., and E. Jakobsson. (2002) A study of mutations of ompf porin using Poisson-Nernst-Planck theory. Biophys. J. 82: 207a.
88. Chiu, See-Wing, Varma, S.,
Jakobsson, E., Tang, J.M., van der Straaten, T., Eisenberg, and R.S. (2002)
Molecular dynamics of permeation in porin and its mutant G119D. Biophysical Journal. 82:208a.
89. Gillespie, D., Nonner, W., and
90. Nonner, Wolfgang, Gillespie, Dirk, Eisenberg, Bob, and
91. Chen, Duan, Kuang, Zhifeng,
Boda, Deszo, Eisenberg, Bob, Busath, David and
92. Boda, Dezso, Gillespie,
Dirk, Nonner, Wolfgang,
93. Miedema, Henk,
Meter-Arkema, Anita, Wierenga, Jenny, Hektor, Hans, Tang, John, Eisenberg, Bob,
and Wim Meijberg. (2004)
Permeation properties of an engineered OmpF containing the EEEE locus of
Ca-channels. Biophysical
Journal 86 260a.
94. Nonner, Wolfgang, Gillespie, Dirk, and
95. Aguilella-Arzo, Marcel, Garcia-Celma, Juan, Aguilella, Vicente, and Robert Eisenberg. (2004) Computing numerically access resistance of a channel. Biophysical Journal 86 629a.
96. Peyser, Alexander, Nonner, Wofgang R., Gillespie, Dirk, and Eisenberg Bob. (2005) Electrostrictive Forces in S4 Models. Biophysical Journal 88 458a.
97. Henderson, D., Boda, D., Valisko, M., Gillespie, D, Eisenberg, B., and Nonner, W. (2005) New constant voltage method of simulating ions in a dielectric near a metallic electrode PacifiChem 2005, Honolulu HI.
98.
Eisenberg, R. S. (2005) Ions in channels: Life's transistors PacifiChem 2005,
99.
Wilk, S.J., Petrossian, L., Goryll, M.,
100. Siwy, Z, Powell,
M., Kalman, E., Heins, E., Martin, C.R., and Eisenberg, R.S.. (2006). Pores in plastic can be calcium sensitive and
gate. Biophysical Journal 90 314a.
101. Boda, Dezso, Valisko, Monika,
Gillespie, Dirk, Nonner, Wolfgang, Henderson,
102. Nonner, Wolfgang, Gillespie, Dirk, and Eisenberg, Bob. (2006) How Do Long Pores Make Better K Channels? Biophysical Journal 90 239a.
103. Eisenberg, Bob. (2007) . How can a channel tell Ca2+ from Na+ ? Biophysical Journal 92 342a; Symposium 14: Modeling as a Tool in Biophysics.
104. Siwy, Zuzanna S., Powell, Matthew R., Kalman, Eric, and Eisenberg Robert S. (2007) Gating, Modulation, and Rectification in a Large Diameter Abiotic Nanopore. Biophysical Journal 92 342a Symposium 14: Modeling as a Tool in Biophysics.
105. Boda, Dezso, Valisko, Monika,
Eisenberg, Bob, Nonner, Wolfgang, Henderson,
106. Powell, Matthew R., Sullivan, Michael, Siwy, Zuzanna S., and Eisenberg. Robert S. (2007) Stochastic Sensing of Analytes by a Synthetic Nanopore with Adaptor. Biophysical Journal 92 p. 649a.
107. Arning, Kattrin, Burger, Martin, Engl, Heinz, Eisenberg, Robert, He, Lin, and Marie Wolfram. (2007) Simulation of ion transport through nanopores. International Conference on Simulation of Semiconductor Processes and Devices (SISPAD).
108. Powell, Matthew R., Sullivan, Michael, Vlassiouk, Ivan, Constantin, Dragos, Sudre, Olivier, Martens, Craig, Eisenberg, Robert S., and Siwy, Zuzanna. (2008) Ion Current Oscillations Caused by Femtoliter Volume Precipitation in a Nanopore.
Biophysical Journal 94 p. 333a. Poster [PDF]109. Boda,
Dezső, Nonner, Wolfgang, Valisko, Monika, Henderson,
110. Eisenberg, Bob, Roth, Roland, Gillespie, Dirk, and Nonner, Wolfgang. (2008) Bubbles, Gating, and Anesthetics in Ion Channels. Biophysical Journal 94 p. 1040a. Abstract [PDF]
111. Eisenberg, Bob, Boda, Dezső, Giri, Janhavi, Fonseca, James, Gillespie, Dirk, Henderson, Doug, and Nonner, Wolfgang. (2009) Self-organized Models of Selectivity in Ca and Na Channels. Biophysical Journal, Volume 96, Issue 3, 253a. Abstract [PDF] and Poster [PDF] Other versions available at Institute of Mathematics and its Applications IMA, University of Minnesota, Self-Organizd IMA link and on the http://arxiv.org with PaperIDs http://arxiv.org/abs/0906.5173 [PDF]
112. Knepley, Matthew
G., Karpeev, Dmitry A., Eisenberg, Robert S., and Gillespie, Dirk. (2009) Energetics of Calcium Selectivity: A Three-Dimensional Classical Density Functional
Theory Approach. Biophysical
Journal, Volume 96, Issue 3, 661a. Abstract
[PDF] and Poster [PDF]
113. Mori,
Yoichiro, Liu, Chun, and RS Eisenberg (2010) A multidomain model for
electrodiffusion and water flow Volume 98 pp. 96a Abstract [PDF] and Poster
511 [PDF]
114. Fonseca,
James E. Boda, Dezső, Nonner, Wolfgang, and Bob Eisenberg (2010)
Conductance and concentration relationship in a reduced model of the K+ channel. Volume 98 pp.
117a Abstract [PDF] and Poster 613 [PDF]
115. Zhang,
Chao, Raugei, Simone, Eisenberg, Bob, and Paolo Carloni. (2010) On the domain of applicability of currently used force
fields for the calculation of the activity of alkali ions at physiological
ionic strength. Biophysical Journal. Volume 98 pp. 330a - 331a.
Abstract [PDF] and Poster 1718 [PDF]
116. Giri,
Janhavi, Eisenberg, Bob, Gillespie, Henderson, Douglas, and Dezső Boda. (2010) Monte Carlo simulation of free energy components. Energetics of selective binding in a reduced model of L-type Ca2+ channels. Biophysical
Journal. Volume 98 pp. 514a – 515a Abstract [PDF] and Poster 2665 [PDF]
117. Eisenberg,
Robert S., Hyon, YunKyong, and Chun Liu. (2010) Energetic
Variational Analysis EnVarA of ions
in calcium and sodium channels. Biophysical Journal.
Volume 98 pp. 515a.
Abstract [PDF] and Poster 2666 [PDF]
† Contains original research material, not published elsewhere.
† Contains original material.
† Contains original research material, not published elsewhere but not refereed.
† Contains original research material, not published elsewhere but not refereed.
† Contains original research material, not published elsewhere but not refereed.